PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545709.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 264aa MW: 29309.1 Da PI: 10.3688

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.8e-32	68	121	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+++AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023545709.1 68 PRMRWTTTLHAHFVHAVQLLGGHDRATPKSVLELMNVKDLTLAHVKSHLQMYRT 121 9****************************************************7 PP
2	Myb_DNA-binding	48.1	2.8e-15	69	120	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ XP_023545709.1 69 RMRWTTTLHAHFVHAVQLLGGHdraTPKSVLELMNvKDLTLAHVKSHLQMYR 120 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MFTSTHMITN TTAPPLPDLS LQISPPSDSG SSGSDLSHEN AAFLLPPKTH FKGDAKMGFG 60 IKRRIRAPRM RWTTTLHAHF VHAVQLLGGH DRATPKSVLE LMNVKDLTLA HVKSHLQMYR 120 TVKGTDKATD TGLKIQSQEI NVNGASRCEN SNPPLTMRKS PNQIWNLFSS SMETNREMTS 180 RWSQHSNNSI GNNQQQQKDR QNGDASMKFL SGVKKQRLEG SCLSLCDHNN NNTVNLDFSL 240 GCPNSLTIHS NPSQMLNSKQ TLSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.2	5e-42	G2-like family protein