PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545577.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 354aa MW: 39889.6 Da PI: 8.8949

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	53	7.5e-17	30	63	2	35
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCka 35 +++ lkcprCdstntkfCyynny+l+qPr+f ++ XP_023545577.1 30 QQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFXQQ 63 57899**************************875 PP
2	zf-Dof	123.7	6.3e-39	66	126	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ lkcprCdstntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk kk + XP_023545577.1 66 QQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLK 126 68899****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MRPSSQEEIS QNSGTTRTKS SSNTKQQQTQ QQPLKCPRCD STNTKFCYYN NYCLTQPRHF 60 XQQQQQQQPL KCPRCDSTNT KFCYYNNYCL TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR 120 KTKKLKSSSS SSSSNNSKLL PSGDTPAFRF FAGISPSIDF QLNGGLGVGL SSSSPQLFPT 180 TPTTNHPYMS LNYDTNFPLI HHHNTNSNLN LQPHYNTNTT LASSIQSLSS LNQDLHSKLQ 240 QHRLAMIFGD HDHVQNKDQN HKLLQPILFH NLETPKQDSC FNIHDPRTQS AAASTTGEDA 300 TTTEWFFGNN SYDDRPNHHQ VSATNSAGAN GWNHTNNNNG VQAWEDLHHF TALP

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MRPSSQEEIS QNSGTTRTKS SSNTKQQQTQ QQPLKCPRCD STNTKFCYYN NYCLTQPRHF  60
XQQQQQQQPL KCPRCDSTNT KFCYYNNYCL TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR  120
KTKKLKSSSS SSSSNNSKLL PSGDTPAFRF FAGISPSIDF QLNGGLGVGL SSSSPQLFPT  180
TPTTNHPYMS LNYDTNFPLI HHHNTNSNLN LQPHYNTNTT LASSIQSLSS LNQDLHSKLQ  240
QHRLAMIFGD HDHVQNKDQN HKLLQPILFH NLETPKQDSC FNIHDPRTQS AAASTTGEDA  300
TTTEWFFGNN SYDDRPNHHQ VSATNSAGAN GWNHTNNNNG VQAWEDLHHF TALP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	2e-31	Dof family protein