PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545515.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 308aa    MW: 33972.4 Da    PI: 8.8363
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.14.8e-30139199160
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                     ++Dgy+WrKYGqK+ k+++ pr+YY+C++a +Cpvk+kv+rs edp++++ tYegeHnh+k
  XP_023545515.1 139 VKDGYQWRKYGQKVTKDNPSPRAYYKCSFApSCPVKRKVQRSVEDPSYLVATYEGEHNHPK 199
                     58***************************99****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEPSATINTS LDLNFNPPPY TDDESPATST LTPLKAETPA VLAEKLNRMS SENQKLNQML  60
GRVVENYSLL QNQVIRLMFK SRKRKAGCDS CNFNRNGSDQ YCGCCSDDDS CYKRPRESSK  120
PKVMRVLVST PVSDSSLVVK DGYQWRKYGQ KVTKDNPSPR AYYKCSFAPS CPVKRKVQRS  180
VEDPSYLVAT YEGEHNHPKP NSGIEYQLVG PIQLGSNLDS SVSSPSSSVV KGPSIMPSVV  240
TYDYLSKSPS TTTTVKASVP ELETPPASSS TQTILVQQMA SLLTRDPNFT RALATAITGT  300
MVDKEIWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.13e-64WRKY family protein