PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023545435.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | CO-like | ||||||||
Protein Properties | Length: 326aa MW: 35895.4 Da PI: 7.6817 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 26.8 | 1e-08 | 15 | 50 | 3 | 39 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkgHtv 39 ++ C +++ ++ lfC+ + +lC C +++H +Ht+ XP_023545435.1 15 KPLCYSCKSAPAALFCRHDAAFLCLRCDDQIH-SHTT 50 689*****************************.9996 PP | |||||||
2 | zf-B_box | 26.5 | 1.4e-08 | 57 | 99 | 3 | 39 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 + C+ +e+ ++++ C+ + lC++C +H + H++ XP_023545435.1 57 VWLCEVCEQAPATITCNADAAALCPSCDADIH-SvnplarrHDR 99 689*****************************.33566666765 PP | |||||||
3 | CCT | 69.4 | 9.1e-24 | 251 | 295 | 1 | 45 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Rea++lRY+eK+k+RkFeK+irY+sRKa+Ae RpRvKGrFvk++e XP_023545435.1 251 REARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRVKGRFVKRSE 295 9*****************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MHSFAGGWPA VATAKPLCYS CKSAPAALFC RHDAAFLCLR CDDQIHSHTT GTRHPRVWLC 60 EVCEQAPATI TCNADAAALC PSCDADIHSV NPLARRHDRS AIQPFYDSPP SASVASVFKF 120 LLPTQHQHDV GHPDLKSEDI FFSDMDSLID FDYPTAGDGV VPDQSNPGTE STTQPADYST 180 GNFCGFELCS TRSKLDTISY PSHNLSHSVS SSSLDVVAVP DRNTASDASY PAGQTALPTT 240 EKVVQLRGMD REARVLRYRE KKKNRKFEKT IRYASRKAYA EIRPRVKGRF VKRSEMKSEM 300 ERMYAGAGVG YMSRDGQYGV VPSLIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57660.1 | 1e-81 | CO-like family protein |