PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023545249.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 689aa MW: 74211.4 Da PI: 6.6682 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.8 | 3.1e-16 | 449 | 495 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_023545249.1 449 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 495 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 689 aa Download sequence |
MPLSELCRVA REKLDSAQDR NNMVASDLSL SPENDVFELV WENGQILQQG QSSRTRKNSN 60 MNTSQPLCLP GHLNNAKMGK FGAIDSVVRD VIATGSSPEV ELARDDDDDD NDIVPWLSYP 120 LDGHLQHDYS SDFLPELSGV TINDHPARHS VASSIGKANG VHQVNRDTRL NSLHGTNLED 180 GNISKLSTLD VSTTGPRSST NELRSLAPQQ SQTLFPHLRV RCTGSTENAS GKILRDSLMG 240 QTLQVPLIAS SSSSTARQKL DPTPSSNSPN VINFSHFLRP AALLKSNPQN HGVVGTVGSA 300 ATSQRDQSSC IRNESKTCCK NAIVPSIDDN KPSDAKAPEQ LRAVKHPKLA CLGDSANNED 360 RPDRCLQVGA PKVLPDSEKA VESAFAASVC SRNSVEGASD DPTLNRKRKC HETEDSEWHS 420 DDVEEECNDV KRVTPTRGTG SKRSRAAEVH NLSERRRRDR INEKMRALQE LIPNCNKVDK 480 ASMLDEAIEY LKTLQLQVQV MLCFLRQKNI MSMGAGLFMP PMMSPGGMPF MNAPHMYSPM 540 GVGMGMGFGI GMPDVNVGSP GYPMVQVPHV QGTHFPGPSI PAQTVMHGMP GSNFQVLGLP 600 GQGLPIPMPR GPIAPFTGGP FMTNPGVAVA PVENFGSAAA CSSKDASPKS DSPMVPNGGT 660 DPLTTPTPRQ ANEQASCANG QPCEPHHQK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 454 | 459 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 2e-59 | bHLH family protein |