PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545225.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CPP

Protein Properties

Length: 589aa MW: 63259.8 Da PI: 7.6411

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545225.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.1	4.1e-14	118	157	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C N+ e+ XP_023545225.1 118 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCINCYNNVEN 157 89************************.******9875 PP
2	TCR	50.9	3.1e-16	202	241	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_023545225.1 202 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 241 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MGEEDSVGAP QKKAQSEGAA LSNSSSSDIP SKKLARQLDF TGYGGASHPQ SHSDPHSQPQ 60 APLVAQNLPQ APPKPPPQMV AASIASLAPH SSVRAVKPES PMSRARPAIE AKDSTPKKQK 120 QCNCKHSRCL KLYCECFASG IYCDGCNCIN CYNNVENDTA RREAVEATLE RNPNAFRPKI 180 ASSPHGMRDN REEAGELLML GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF 240 EGSEERQALF HGDHGNNIAF IQQAANAAIT GAIGSSGYAS PPVSKKRKGQ ELYFGLTAKE 300 LPAHRPVPFQ QANHIRVAAP PLPSFPIAGV GTPSLLGPSK FTYRSLMADI IQSQDLKDLC 360 SVLVVLSSEA AKTYQDQTNA TEKQSDAQTE TSAASSTQDR LQKKDASDEK AAADDRSSAN 420 QADKTTPDDS NSDGGDVPKG APMSPGTLAL MCDEQDTMLM ATASHNRLMG PGCSTSSQLP 480 HGRDTSEVYA EQERIVLTKL RDCLNRLITL GEIKETQCSS LARSEVGNQE QQFNNGATNS 540 TTETQSNIGQ LNNKVTKSSI PPSVKTSQTV TTAVMTLSND QRQKVLPLS

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MGEEDSVGAP QKKAQSEGAA LSNSSSSDIP SKKLARQLDF TGYGGASHPQ SHSDPHSQPQ  60
APLVAQNLPQ APPKPPPQMV AASIASLAPH SSVRAVKPES PMSRARPAIE AKDSTPKKQK  120
QCNCKHSRCL KLYCECFASG IYCDGCNCIN CYNNVENDTA RREAVEATLE RNPNAFRPKI  180
ASSPHGMRDN REEAGELLML GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF  240
EGSEERQALF HGDHGNNIAF IQQAANAAIT GAIGSSGYAS PPVSKKRKGQ ELYFGLTAKE  300
LPAHRPVPFQ QANHIRVAAP PLPSFPIAGV GTPSLLGPSK FTYRSLMADI IQSQDLKDLC  360
SVLVVLSSEA AKTYQDQTNA TEKQSDAQTE TSAASSTQDR LQKKDASDEK AAADDRSSAN  420
QADKTTPDDS NSDGGDVPKG APMSPGTLAL MCDEQDTMLM ATASHNRLMG PGCSTSSQLP  480
HGRDTSEVYA EQERIVLTKL RDCLNRLITL GEIKETQCSS LARSEVGNQE QQFNNGATNS  540
TTETQSNIGQ LNNKVTKSSI PPSVKTSQTV TTAVMTLSND QRQKVLPLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-178	CPP family protein