PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023545185.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 211aa MW: 24230.2 Da PI: 9.883 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.7 | 6.1e-21 | 38 | 99 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L elF++ r+ps +++++++++l +++ ++V++WFqN++a+e++ XP_023545185.1 38 KCGRWNPTAEQVKVLTELFRSgLRTPSSDQIQKISHQLsfygKIESKNVFYWFQNHKARERQ 99 568*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 113.9 | 8.1e-37 | 38 | 101 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L+el++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ XP_023545185.1 38 KCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKR 101 578***********************************************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 211 aa Download sequence |
MKNNMNMDEG ISSRFYVKPA GGGGDGGGVA GKGSMSSKCG RWNPTAEQVK VLTELFRSGL 60 RTPSSDQIQK ISHQLSFYGK IESKNVFYWF QNHKARERQK RRKVSISLDH THHHHHRQQQ 120 QQQQHFILPP CSNYFADDRS TTNKGGTMEL EPERMMKTLQ LFPLNSIDET EGDNDHKFRV 180 NGKQYEEATA FTYKIGTKMD HPPLDLRLSF L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G11260.1 | 4e-53 | WOX family protein |