PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023545126.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 236aa MW: 26455.9 Da PI: 9.2398 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 125.4 | 5.9e-39 | 92 | 204 | 3 | 121 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaaks 97 kkdrhski+T++g+RdRRvRls+e+ ++fFdLqd+LG+dk+skt++WLl+++ +aikelt+++++++++ ++ +++s + +a +++ + XP_023545126.1 92 MKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELTNSNNNNSNNN-----NNLYNFDS-EFEAHKTTLP 180 69*************************************************************66666222.....22222222.2344444466 PP TCP 98 kksqksaasalnlakesrakarar 121 k +k+ + lakesrak + XP_023545126.1 181 KCCKKNVGFHDVLAKESRAKNFKC 204 666777777799999***998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MFSSTNNLHL FPVQHYFVPS SSSSSSSYHQ LVPPPPPPPP PPPGPAVACP ANNALVLQDL 60 QNPFVGVGEE GRMKNEEEGQ CYSCGVNQKS RMKKDRHSKI YTAQGLRDRR VRLSIEISRK 120 FFDLQDMLGY DKASKTLDWL LNNSRKAIKE LTNSNNNNSN NNNNLYNFDS EFEAHKTTLP 180 KCCKKNVGFH DVLAKESRAK NFKCVRSHGI AAATTNTCTN TYISMVVCGF NPTFYM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67260.2 | 4e-29 | TCP family protein |