PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545102.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 155aa MW: 17368.2 Da PI: 9.7829

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00088	41	63	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++Fs+ L H +H XP_023545102.1 41 FECKTCNRHFSSFQALGGHRASH 63 89**********99999998887 PP
2	zf-C2H2	15.5	4.8e-05	84	106	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+ Fs+ L H+r+H XP_023545102.1 84 HECGLCGQEFSSGQALGGHMRRH 106 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MAAKRIRQEF EATDMAKSPM FISYGIESSN PIIPFQNASV FECKTCNRHF SSFQALGGHR 60 ASHKRPRTTA EDPKEAVDLK HKMHECGLCG QEFSSGQALG GHMRRHRVTA VPEKIPVLKR 120 SGSRRIMCLD LNLTPLENDL KMLFGKMAPT VDLVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	2e-43	C2H2 family protein