PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545024.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 314aa    MW: 33963.4 Da    PI: 10.0082
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.6e-31243300359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeHnh+
  XP_023545024.1 243 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERAGDDPAMLVVTYEGEHNHT 300
                     99************************988****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MAVDLISHPY PPPSTTHNME PNAVQEAASG LESVEKLIRL LSNAQHHSLP TSTQSPNSTS  60
NSPTDFPTDC RAAADAAVSK FKKVISLLGR SRLGHARFRR APLPLPQPQV LYATPIQQIP  120
PHRHLPAGDL DNNDSLTTTL NFSYSSAHNS FISSLTGDCD TKQPSSSSPF QIINLSQVSS  180
AGKPPLSTSS LKRKCSSDNL GSGKCGAASS SGRCHCSKKR KVRVKRVVRV PAISLKMADI  240
PPDDYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE RAGDDPAMLV VTYEGEHNHT  300
LSLPQPSTLI LESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.13e-77WRKY family protein