PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023545024.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 314aa MW: 33963.4 Da PI: 10.0082 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.2 | 2.6e-31 | 243 | 300 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+ XP_023545024.1 243 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERAGDDPAMLVVTYEGEHNHT 300 99************************988****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 314 aa Download sequence |
MAVDLISHPY PPPSTTHNME PNAVQEAASG LESVEKLIRL LSNAQHHSLP TSTQSPNSTS 60 NSPTDFPTDC RAAADAAVSK FKKVISLLGR SRLGHARFRR APLPLPQPQV LYATPIQQIP 120 PHRHLPAGDL DNNDSLTTTL NFSYSSAHNS FISSLTGDCD TKQPSSSSPF QIINLSQVSS 180 AGKPPLSTSS LKRKCSSDNL GSGKCGAASS SGRCHCSKKR KVRVKRVVRV PAISLKMADI 240 PPDDYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE RAGDDPAMLV VTYEGEHNHT 300 LSLPQPSTLI LESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G23320.1 | 3e-77 | WRKY family protein |