PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544917.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 286aa MW: 32297.9 Da PI: 7.5976

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101	7.8e-32	56	109	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH+rFv+ave+LGG+e+AtPk +l+lm++kgL ++hvkSHLQ+YR+ XP_023544917.1 56 PRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQMYRS 109 8****************************************************7 PP
2	Myb_DNA-binding	49.9	7.4e-16	57	108	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++ ++v+av++lGg t+k++ + m+ kg+ ++ks++q+y+ XP_023544917.1 57 RLRWTSDLHSRFVHAVERLGGQenaTPKLVLQLMNiKGLNIAHVKSHLQMYR 108 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MEAGSDGGGA AAEVAAECSN SGSELGNEGS SSNSTIEEND QQKKPSVRPY VRSKLPRLRW 60 TSDLHSRFVH AVERLGGQEN ATPKLVLQLM NIKGLNIAHV KSHLQMYRSK NTNESSQVMD 120 QRVIMNESCG DHNIFTVSQI PMFQRFNQSY ASNVFRFGGS TWNAYETKTI QTPYTEKARS 180 RLFGSSKSAT PGTTICKNHS SIGEQNTTTS KREEMREKED PCRDIIITEK RKTPDGEIDL 240 SLSLKIAPTE GMKIDKRRRT REEHEQEHEE HEEQRRTDLT LSLCPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-47	G2-like family protein