PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544891.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Trihelix

Protein Properties

Length: 286aa MW: 32245 Da PI: 6.5503

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.6	2.5e-16	24	114	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +L+++ ++ +l+rg+l++++W++v++++ ++++ +r+ +qCk++++ ++k+yk +k++ + + ++s++p++d+l+ XP_023544891.1 24 CWSEEATSTLVDVWGRRFVELNRGNLRQKDWQDVAEAVnalhgHSKKTHRTDVQCKNRIDTIKKKYKIEKARVSASNGSVTSSWPFYDRLD 114 7****************************************9************************9999999999*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MGDLNDSLTP SSGHSRPMPV REDCWSEEAT STLVDVWGRR FVELNRGNLR QKDWQDVAEA 60 VNALHGHSKK THRTDVQCKN RIDTIKKKYK IEKARVSASN GSVTSSWPFY DRLDGLIGSN 120 FSQKKPSTSM SQSPPMARPL SYRKAPSSGT ANAVSVAIPQ KRPLAAVDDG FFRRNYSAMA 180 AAAAATEAEE DEEEEEAEAE AEERGSEDEE GEGEGMRRLA KAIERFGKMY ERVEAEKLRQ 240 MVELEKQRMQ FAKDLEVQRM QMFTETQVQL ERIKRGKKSG SNDIYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	5e-66	Trihelix family protein