PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544849.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 315aa    MW: 33898.3 Da    PI: 8.2122
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1261.2e-392484262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +++alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvPvGgg+r+nkk++
  XP_023544849.1 24 HQQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPVGGGCRRNKKVK 84
                    6899******************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MLPEKAGVGG CRSKNDQTKP TSDHQQALKC PRCDSPNTKF CYYNNYSLTQ PRHFCKTCRR  60
YWTKGGALRN VPVGGGCRRN KKVKTSSSFR LQTSKDDSGS SNPEVGRLGF FVNGFASSQL  120
GGNQTSGFSP VPSTGLYDQF GVFSLDQSRS PNSMNPSTGF INSLNLDTSL ASSIESLSSM  180
NQDLHWKLQQ QRLAMLLGGH NSPATDKNRG VSSPIPLEDH AQELNPGSFR NLEISKPDAF  240
NSSDFNNARK ETVVGSGGDS AAADEWFFGD SYAPSSIMAG TAGAAAAGYN SGDSAAAGCD  300
GVREWHDLHQ YTHLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.16e-46Dof family protein