PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023544792.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HSF | ||||||||
Protein Properties | Length: 241aa MW: 27750.3 Da PI: 9.5889 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 112.3 | 3.4e-35 | 38 | 129 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y+++ed++++++isw+ +g++fvv+++ efak+vLpk Fkh nf+SFvRQLn+YgF+kv++++ weF +++F+kg+ke+l++ XP_023544792.1 38 FLVKTYTVVEDPATDKVISWNGEGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTR---------WEFCNDKFRKGEKEKLCE 123 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_023544792.1 124 IRRRKA 129 ***985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MEAGVSDNNG DQKGLRLPLP SPPRTVESMM KKSTPPPFLV KTYTVVEDPA TDKVISWNGE 60 GTAFVVWQTA EFAKDVLPKL FKHCNFSSFV RQLNTYGFRK VTTTRWEFCN DKFRKGEKEK 120 LCEIRRRKAW TNKQQHEVQH EVDEDQRSSS SNSSSSQYNT LMDENKRLKK ENGDLSSELA 180 SMKGKCRELL DLVAKYGNGS RKEDEDERPK LFGVRLEVEG ERRRKTKRAE ETAFLPSQSC 240 K |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 222 | 227 | RRRKTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 3e-65 | HSF family protein |