PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023544771.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 549aa MW: 60972.9 Da PI: 6.6884 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 416.1 | 3e-127 | 178 | 549 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l+++L++cA+a++++dl+ a+ ++ l +++s +gdp qRl ay++e+L+arl rs+s +ykal+++e + sse +++++++++++P++kf++ XP_023544771.1 178 LRDTLIHCAQAIHDSDLNVATLFMDVLGKMVSVSGDPAQRLGAYLLEGLRARLERSGSAIYKALKCEEPT---SSELMSYMSVLFQICPYFKFAY 269 5789*****************************************************************9...9999****************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187 aN I ea+ +e +HiiDf+i qG Q+++L++ La+Rp+gpp lRiTgv++++s+ + l+ +g++La++A++ g+pf+f++ +a + XP_023544771.1 270 TSANAIIWEAMVNEPIIHIIDFQIAQGSQYIPLIHDLANRPGGPPvLLRITGVDDSQSShaRGGGLQIVGQKLAQLAQSKGIPFQFHA-AAMSGC 363 *****************************************9999789*******9988889999***********************.899999 PP GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282 ++e ++Lr++pgEalaVn+ + lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n+++Fl rfle+l+yy+a+f+s+++ +r++++r XP_023544771.1 364 EVERSNLRIRPGEALAVNFPYVLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIVEQESNTNTSPFLLRFLETLDYYTAMFESIDVARSRDDKQR 458 *********************************************************************************************** PP GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 i E+++++r+ivn+vaceg+er+erhe l+kWr+r+++aGF+++pls+++ +k llr ++++ yr++e +g+l+lgWk+r++ + SaWr XP_023544771.1 459 IRAEQHCVARDIVNMVACEGFERIERHELLGKWRMRMKMAGFTSYPLSSSVSGAVKNLLRDFNGN-YRLQEVDGALYLGWKNRAMATSSAWR 549 ***************************************************************77.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence |
MRASRNSQAL SGIHEMHHQS VQKIDPYYLS HLHVLENNVS PDASSQGNSV NFSSFKDQFF 60 TLESFPATAD LSACNSPSAV SGLSSRSPFS PQGSQSCSSD QPHSFDNTCG SPQSGCSVTD 120 DDNELKYKLK ELEISLLGPE SDIGDSCYCS FRGGAHQDAS VARWNWNQVA EMIPRLNLRD 180 TLIHCAQAIH DSDLNVATLF MDVLGKMVSV SGDPAQRLGA YLLEGLRARL ERSGSAIYKA 240 LKCEEPTSSE LMSYMSVLFQ ICPYFKFAYT SANAIIWEAM VNEPIIHIID FQIAQGSQYI 300 PLIHDLANRP GGPPVLLRIT GVDDSQSSHA RGGGLQIVGQ KLAQLAQSKG IPFQFHAAAM 360 SGCEVERSNL RIRPGEALAV NFPYVLHHMP DESVSTQNHR DRLLRLVKSL SPKVVTIVEQ 420 ESNTNTSPFL LRFLETLDYY TAMFESIDVA RSRDDKQRIR AEQHCVARDI VNMVACEGFE 480 RIERHELLGK WRMRMKMAGF TSYPLSSSVS GAVKNLLRDF NGNYRLQEVD GALYLGWKNR 540 AMATSSAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17230.1 | 0.0 | GRAS family protein |