PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544769.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 549aa    MW: 60972.9 Da    PI: 6.6884
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544769.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS416.13e-1271785491374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+++L++cA+a++++dl+ a+ ++  l +++s +gdp qRl ay++e+L+arl rs+s +ykal+++e +   sse +++++++++++P++kf++
  XP_023544769.1 178 LRDTLIHCAQAIHDSDLNVATLFMDVLGKMVSVSGDPAQRLGAYLLEGLRARLERSGSAIYKALKCEEPT---SSELMSYMSVLFQICPYFKFAY 269
                     5789*****************************************************************9...9999****************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                       aN  I ea+ +e  +HiiDf+i qG Q+++L++ La+Rp+gpp  lRiTgv++++s+  +   l+ +g++La++A++ g+pf+f++ +a +  
  XP_023544769.1 270 TSANAIIWEAMVNEPIIHIIDFQIAQGSQYIPLIHDLANRPGGPPvLLRITGVDDSQSShaRGGGLQIVGQKLAQLAQSKGIPFQFHA-AAMSGC 363
                     *****************************************9999789*******9988889999***********************.899999 PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     ++e ++Lr++pgEalaVn+ + lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n+++Fl rfle+l+yy+a+f+s+++  +r++++r
  XP_023544769.1 364 EVERSNLRIRPGEALAVNFPYVLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIVEQESNTNTSPFLLRFLETLDYYTAMFESIDVARSRDDKQR 458
                     *********************************************************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     i  E+++++r+ivn+vaceg+er+erhe l+kWr+r+++aGF+++pls+++   +k llr ++++ yr++e +g+l+lgWk+r++ + SaWr
  XP_023544769.1 459 IRAEQHCVARDIVNMVACEGFERIERHELLGKWRMRMKMAGFTSYPLSSSVSGAVKNLLRDFNGN-YRLQEVDGALYLGWKNRAMATSSAWR 549
                     ***************************************************************77.*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    
MRASRNSQAL SGIHEMHHQS VQKIDPYYLS HLHVLENNVS PDASSQGNSV NFSSFKDQFF  60
TLESFPATAD LSACNSPSAV SGLSSRSPFS PQGSQSCSSD QPHSFDNTCG SPQSGCSVTD  120
DDNELKYKLK ELEISLLGPE SDIGDSCYCS FRGGAHQDAS VARWNWNQVA EMIPRLNLRD  180
TLIHCAQAIH DSDLNVATLF MDVLGKMVSV SGDPAQRLGA YLLEGLRARL ERSGSAIYKA  240
LKCEEPTSSE LMSYMSVLFQ ICPYFKFAYT SANAIIWEAM VNEPIIHIID FQIAQGSQYI  300
PLIHDLANRP GGPPVLLRIT GVDDSQSSHA RGGGLQIVGQ KLAQLAQSKG IPFQFHAAAM  360
SGCEVERSNL RIRPGEALAV NFPYVLHHMP DESVSTQNHR DRLLRLVKSL SPKVVTIVEQ  420
ESNTNTSPFL LRFLETLDYY TAMFESIDVA RSRDDKQRIR AEQHCVARDI VNMVACEGFE  480
RIERHELLGK WRMRMKMAGF TSYPLSSSVS GAVKNLLRDF NGNYRLQEVD GALYLGWKNR  540
AMATSSAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein