PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544661.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 386aa MW: 43378.4 Da PI: 6.7773

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.8e-32	212	266	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHe+Fv++v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+ XP_023544661.1 212 KTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRI 266 68****************************************************7 PP
2	Myb_DNA-binding	50.2	6.1e-16	216	265	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e++vd+v++lGg t+k+I + m +g+t ++ks++qky+ XP_023544661.1 216 RWTQDLHEKFVDCVNRLGGAekaTPKAILKLMDsEGLTIFHVKSHLQKYR 265 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MNDYGIDSKQ EIHQNHGVMF DCYSQNTRAQ QPWRMGACVH LSAMDEVESS EQQNLGLSNS 60 SSTIINLFES PASAFFATEQ CMGIPPIEFR TGSSSFDRAS DSAEHSGADS EFSNTLQSVV 120 RSQLCKRSFN GFPKTIFTDY KVFDARPPSI GKHFSVPFKD QGGCYDSTSY SIAQPTFCSS 180 QEKNSPRFSC LSSSVGSGSS SSSFNGNGFP TKTRIRWTQD LHEKFVDCVN RLGGAEKATP 240 KAILKLMDSE GLTIFHVKSH LQKYRIAKYM PESADRKSDR RNDMNEVAEL DVKTAMQIKD 300 ALQLQLDVQR RLHDQLEIQR KLQLQIEEQG KRLKIMFDQQ QETNKCFFTA NGFNKPFPND 360 PSGYLDDPPI PTAENIRNAQ FPTNIS

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MNDYGIDSKQ EIHQNHGVMF DCYSQNTRAQ QPWRMGACVH LSAMDEVESS EQQNLGLSNS  60
SSTIINLFES PASAFFATEQ CMGIPPIEFR TGSSSFDRAS DSAEHSGADS EFSNTLQSVV  120
RSQLCKRSFN GFPKTIFTDY KVFDARPPSI GKHFSVPFKD QGGCYDSTSY SIAQPTFCSS  180
QEKNSPRFSC LSSSVGSGSS SSSFNGNGFP TKTRIRWTQD LHEKFVDCVN RLGGAEKATP  240
KAILKLMDSE GLTIFHVKSH LQKYRIAKYM PESADRKSDR RNDMNEVAEL DVKTAMQIKD  300
ALQLQLDVQR RLHDQLEIQR KLQLQIEEQG KRLKIMFDQQ QETNKCFFTA NGFNKPFPND  360
PSGYLDDPPI PTAENIRNAQ FPTNIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	2e-67	G2-like family protein