PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544607.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 241aa    MW: 26886.9 Da    PI: 8.2877
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof113.49.8e-364198259
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59
                    ++++lkcprCdstntkfCyynny+ sqPr+fC+aC+r+Wt+GG+lrnvPvGggr++++
  XP_023544607.1 41 QTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKR 98
                    57899***********************************************976655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MGLSSKQVSI DVFDWSKTLT PPQKLSSAAV KRSHHHQNPS QTEQLKCPRC DSTNTKFCYY  60
NNYNKSQPRH FCRACKRHWT NGGTLRNVPV GGGRKNKRLK KKQIPKSSSS SAAVAAADGV  120
MINTQFSLPL YQGLIFPPPP PPPPPSSTNW VECENFTTNY GILNSQNADF SGVSTTTDQE  180
LKAIETEQPN TTGTHHPWQL PTTNCSGADM SNSSYWSWED IDTFATTDLN ILWDDDHDIK  240
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66940.16e-27Dof family protein