PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544486.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

GeBP

Protein Properties

Length: 408aa MW: 44540.5 Da PI: 6.2391

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	132.3	1.9e-41	174	270	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 klfqrlwse+Dei++L G+id++ak+g++p d++af++f+kks++++v++ qlv+KirrLKkK++++v++ k+g +p+fsk+h+qk felskki XP_023544486.1 174 KLFQRLWSEDDEIAILNGIIDYTAKKGADPALDMNAFHDFIKKSLHVDVTRAQLVDKIRRLKKKYRNNVDRGKKGADPTFSKPHEQKGFELSKKI 268 579******************************************************************************************** PP DUF573 96 Wg 97 Wg XP_023544486.1 269 WG 270 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MAPKRSPLDE PPAASSSELE ETSSGEEEEG VSRDGSSSEE EEDEEETQAQ KPKKSTALPS 60 TPAVDKKTAP KKSELATNSQ AQSSSSDSGS GSDTDSGTSG RNVQPITSNP IEETPKMKKP 120 RSKPSASATP ARSSLKRPSE TVREAKRPKS SEADADDGVV ADDDSKKSVD ESKKLFQRLW 180 SEDDEIAILN GIIDYTAKKG ADPALDMNAF HDFIKKSLHV DVTRAQLVDK IRRLKKKYRN 240 NVDRGKKGAD PTFSKPHEQK GFELSKKIWG GEGITRTPVV EQPKSNANGT PKKNQRGSST 300 KTLASLKAEL LPSPDAPKDD DKMKIDDNQA PSGCMDGFVA FERSLGAAGF PESFLKPGLN 360 LIGQSKRTEL EEEWKKLHLA ELELFLKRTD LIRDQAKLIL DAYKSSDK

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MAPKRSPLDE PPAASSSELE ETSSGEEEEG VSRDGSSSEE EEDEEETQAQ KPKKSTALPS  60
TPAVDKKTAP KKSELATNSQ AQSSSSDSGS GSDTDSGTSG RNVQPITSNP IEETPKMKKP  120
RSKPSASATP ARSSLKRPSE TVREAKRPKS SEADADDGVV ADDDSKKSVD ESKKLFQRLW  180
SEDDEIAILN GIIDYTAKKG ADPALDMNAF HDFIKKSLHV DVTRAQLVDK IRRLKKKYRN  240
NVDRGKKGAD PTFSKPHEQK GFELSKKIWG GEGITRTPVV EQPKSNANGT PKKNQRGSST  300
KTLASLKAEL LPSPDAPKDD DKMKIDDNQA PSGCMDGFVA FERSLGAAGF PESFLKPGLN  360
LIGQSKRTEL EEEWKKLHLA ELELFLKRTD LIRDQAKLIL DAYKSSDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	7e-39	GeBP family protein