PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544408.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 266aa    MW: 29408.8 Da    PI: 9.9832
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544408.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.81.4e-392582562
          zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ +
  XP_023544408.1 25 ALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLK 82
                    789****************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MASASRIMDK PRQEQQQQRP PVAPALKCPR CDSSNTKFCY YNNYSLSQPR HFCKACKRYW  60
TRGGTLRNVP VGGGCRKNKR LKSSSSSSFS SVNATPTSTP TQKPRLHNNS IINSATNIIP  120
SSPMFFGVHN TNPSPLNLQF STLDSVSGLL NLSPLPPFDA IGSGLGFSHI GDLRETFNSP  180
KQIQDISIHA THFHPPAISF DRNSQFFGNF EAGLMKEDLN RLSHNQTEQV DPSNFSDPSR  240
FWNSATTATS NWHDPTNNGS SIASLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.27e-35Dof family protein