PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544291.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 366aa MW: 40175.8 Da PI: 7.6111

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.2	2.5e-17	50	110	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ +l ++ +++V++WFqNr+ + k+ XP_023544291.1 50 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRGQLqeygQVGDANVFYWFQNRKSRSKN 110 89***************99***********************************995 PP
2	Wus_type_Homeobox	110.3	1.1e-35	49	111	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+ +L+eyG+++d+NVfyWFQNrk+R+++k XP_023544291.1 49 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRGQLQEYGQVGDANVFYWFQNRKSRSKNK 111 579**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MASSNSHWPS MFKSKPCNSH HQWQHDINCL RSAPYNTVVG GYEEKSPDPK PRWNPKPEQI 60 RILEAIFNSG MVNPPRDEIR KIRGQLQEYG QVGDANVFYW FQNRKSRSKN KLRHLHNSKS 120 NHNSPTTTTT AAAAAPTTTT TKTTTLSPTA ANPTNPTNPA ATCSSSSSSD KSSPKISPMK 180 SFTSNSVSQS YLQQPTNELL PESFFFPMPQ TGDGGGVISN LGQGFCFSEL CSVVQHVPDH 240 GFESCTNLLL SESDPFKKDL MKSQPQPQPQ FMNYHPYLDI STDQSLPQTT ISTAIPQGVG 300 EVYGVGGKST VFINGVAFEV GCGPFNVREA FGDDAVLIHS TGQPVLTNDW GLTLHSLQHG 360 AYYYLI

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MASSNSHWPS MFKSKPCNSH HQWQHDINCL RSAPYNTVVG GYEEKSPDPK PRWNPKPEQI  60
RILEAIFNSG MVNPPRDEIR KIRGQLQEYG QVGDANVFYW FQNRKSRSKN KLRHLHNSKS  120
NHNSPTTTTT AAAAAPTTTT TKTTTLSPTA ANPTNPTNPA ATCSSSSSSD KSSPKISPMK  180
SFTSNSVSQS YLQQPTNELL PESFFFPMPQ TGDGGGVISN LGQGFCFSEL CSVVQHVPDH  240
GFESCTNLLL SESDPFKKDL MKSQPQPQPQ FMNYHPYLDI STDQSLPQTT ISTAIPQGVG  300
EVYGVGGKST VFINGVAFEV GCGPFNVREA FGDDAVLIHS TGQPVLTNDW GLTLHSLQHG  360
AYYYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	6e-58	WOX family protein