PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544280.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 613aa    MW: 65886.8 Da    PI: 6.7965
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.11.1e-30346404259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  XP_023544280.1 346 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 404
                     7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 613 aa     Download sequence    
MDKGWGLTVR DSDHSIGFLS HNPSPLTLNS FHTMFRATDF PVKLSRTDDN DAPPPPPDDN  60
RFVVNEVDFF SDNKRVADNQ EDQDAKPSAN ILATVLVNKN DNVSTATGTA FVNTGLHLLT  120
ANTGSDQSST VDDGVSSDGD DKRAKNELAQ LQMELQRMKA ENHKLRDMLS HVSNNYSTLQ  180
MHFFTLLQQN QASQPGHEAE IGEKKSRELK QEVGRAVVPR QFMDLGPSGN TAEMDELSNS  240
SSDERTRSGS PLNNNNNNNS ESASKKSSAR DHLEIAAPSE QGNSNARDAK RSIPREESSE  300
SESHGWGPNK APRFNSSTKP LEQSTEATMR KARVSVRARS EAPMISDGCQ WRKYGQKMAK  360
GNPCPRAYYR CTMAVGCPVR KQVQRCAEDR TILITTYEGN HNHPLPPAAM AMASTTTAAA  420
TMLLSGSMSS ADHNLMNPNL LARAILPCSS SMATISASAP FPTITLDLTQ TPNPLQFQRP  480
AAAPFHLPFP GGQPPLPPAQ VLGQPLYNQS KFSGLQLSHE MGANSPHLGH PQIAQPAPTT  540
QSGGASFADT LSAATAAITA DPNFTAALAA AISSIIGGAH SNTNSTTTTN TTTNNNNNNN  600
GDNNSKISSF PGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-109WRKY family protein