PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544128.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Nin-like
Protein Properties Length: 170aa    MW: 19943.9 Da    PI: 9.3557
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK63.43.7e-2065972052
          RWP-RK 20 dAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                    +A+++L+v+lTvLKr+CR++GI+RWPhRkiks+
  XP_023544128.1 65 EASRSLNVGLTVLKRKCREFGIHRWPHRKIKSI 97
                    8******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MMSSGFSTEF PNVADPMHDS YLSCFPKLND DKFLHQDLNF LPCSSSMAVS KGPEIHQMKE  60
FCEPEASRSL NVGLTVLKRK CREFGIHRWP HRKIKSIDGL IRDLQEEAKH REEDQKALMA  120
VTKRQMMLQN ERESIERTPF RELESETKRF RQDVFKRRHK ARALVSHSPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.17e-35Nin-like family protein