PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544107.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family TCP
Protein Properties Length: 454aa    MW: 49380.5 Da    PI: 7.5279
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.58.4e-37862352134
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssasec.eaess 78 
                      g+kdrhsk+ T++g+RdRRvRls+ +a++f+dLqd+LGfd++sk+ieWL+++a  ai el+++                        + +++s 
  XP_023544107.1  86 SGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLIKAAADAIAELPSLnasfpetpkqlsgekisV------TdQPGSL 174
                     689*************************************************************776654444433332220......1222222 PP

             TCP  79 sssasnsssg.........kaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134
                              +          + +++a+s++s++s+ s l+l++      r kar+ra+er ++++ +++
  XP_023544107.1 175 D--------PveqnqsqlhVSLSKSACSSNSETSKGSGLSLSRsevrVNRLKARERAKERAQKEKEKEQ 235
                     2........022222223344444446666666666666666642336669999999996655554443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MEVVDNIQEQ PRKFPRLATG RSSDSNKIGL KGIENIQPED EEDKESKRVG GSTALVGSGV  60
VVGDDDDGNQ LRGWHHSRII RVSRASGGKD RHSKVWTSKG LRDRRVRLSV ATAIQFYDLQ  120
DRLGFDQPSK AIEWLIKAAA DAIAELPSLN ASFPETPKQL SGEKISVTDQ PGSLDPVEQN  180
QSQLHVSLSK SACSSNSETS KGSGLSLSRS EVRVNRLKAR ERAKERAQKE KEKEQDSSRI  240
ADHNLTSMAP NSSFTELLSG GAATVSAHRD AGVAVERQWQ SSTVAMDYFS SGILESSTSR  300
THHSSGFSEQ MNLGTPLPQT MSSTPLFSSV SASDNNAEQL HHFSFVHDGN IIPVATTQPA  360
GGSDYNLNFT IASNLPGYYR GTLQSNSSLL PHIQRFSPVD GSNLPFLFGA ATSSAAPQME  420
NHHHYQFSPA FDGRLQLCYG GGSRQSEQKG KEKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.12e-73TCP family protein