PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023544104.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 454aa MW: 49380.5 Da PI: 7.5279 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 118.5 | 8.4e-37 | 86 | 235 | 2 | 134 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssasec.eaess 78 g+kdrhsk+ T++g+RdRRvRls+ +a++f+dLqd+LGfd++sk+ieWL+++a ai el+++ + +++s XP_023544104.1 86 SGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLIKAAADAIAELPSLnasfpetpkqlsgekisV------TdQPGSL 174 689*************************************************************776654444433332220......1222222 PP TCP 79 sssasnsssg.........kaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134 + + +++a+s++s++s+ s l+l++ r kar+ra+er ++++ +++ XP_023544104.1 175 D--------PveqnqsqlhVSLSKSACSSNSETSKGSGLSLSRsevrVNRLKARERAKERAQKEKEKEQ 235 2........022222223344444446666666666666666642336669999999996655554443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence |
MEVVDNIQEQ PRKFPRLATG RSSDSNKIGL KGIENIQPED EEDKESKRVG GSTALVGSGV 60 VVGDDDDGNQ LRGWHHSRII RVSRASGGKD RHSKVWTSKG LRDRRVRLSV ATAIQFYDLQ 120 DRLGFDQPSK AIEWLIKAAA DAIAELPSLN ASFPETPKQL SGEKISVTDQ PGSLDPVEQN 180 QSQLHVSLSK SACSSNSETS KGSGLSLSRS EVRVNRLKAR ERAKERAQKE KEKEQDSSRI 240 ADHNLTSMAP NSSFTELLSG GAATVSAHRD AGVAVERQWQ SSTVAMDYFS SGILESSTSR 300 THHSSGFSEQ MNLGTPLPQT MSSTPLFSSV SASDNNAEQL HHFSFVHDGN IIPVATTQPA 360 GGSDYNLNFT IASNLPGYYR GTLQSNSSLL PHIQRFSPVD GSNLPFLFGA ATSSAAPQME 420 NHHHYQFSPA FDGRLQLCYG GGSRQSEQKG KEKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18390.1 | 2e-73 | TCP family protein |