PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543987.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 293aa MW: 32558.7 Da PI: 9.4571

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543987.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.7	4e-31	158	213	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p LH+rF++a+++LGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_023543987.1 158 KQRRCWSPGLHRRFIDALHRLGGSQVATPKQIKELMQVDGLTNDEVKSHLQKYRLH 213 79****************************************************97 PP
2	Myb_DNA-binding	40.7	5.5e-13	160	211	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++ ++ +++da ++lGg t+k I + m+ g+t ++ks++qky+ XP_023543987.1 160 RRCWSPGLHRRFIDALHRLGGSqvaTPKQIKELMQvDGLTNDEVKSHLQKYR 211 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MEPSLDLSLD SLPKTIPQIL LQLSSISDSF TKRTTLDDYV KRLEDEMRKI DAFKRELPLC 60 TQIEHWDCEK RRRAFELFKD QSNFVKRSKK EDMAVSEVPK LTLMTTISDP FPVNVNLTVK 120 NGRVGGRSGR AAVSGSSSPA VQINGQTKLS QQQQTIRKQR RCWSPGLHRR FIDALHRLGG 180 SQVATPKQIK ELMQVDGLTN DEVKSHLQKY RLHVRKLAPQ EGSSGEGWIP GEHDGEHHSK 240 TSGTQAGSPD GPLQGGGSGK ALSITEGESM EGEEDAKSDG HSWKGRIQKH GDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49560.1	2e-33	G2-like family protein