PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543963.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 302aa    MW: 33882.8 Da    PI: 5.0078
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.11.9e-35101012102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d++++ ++sw+++g +f+v+++ +fa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++F++g+kell+k
  XP_023543963.1  10 FLTKTYQLVDDPATDGVVSWNQSGATFIVWKTADFARDLLPTYFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFANDNFRRGHKELLSK 95 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  XP_023543963.1  96 IRRRKT 101
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MAQRSLPAPF LTKTYQLVDD PATDGVVSWN QSGATFIVWK TADFARDLLP TYFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF ANDNFRRGHK ELLSKIRRRK TVVMSQPSQT AHPGKFGGGG  120
NSSPSNSGED IGSTSTSSPD SKNPGSVEMG TMAQFADLTE ENEKLRKDNE MLNSELAQTK  180
KQCDELVVFL TDYLKVAPDQ INNIMRNRGS GEDLKGKGKI DEEEEEEEEE EEEEEEEEEE  240
GSVGNGGETL KLFGVWLKGK EEKKKMKRVR EEKIGCSNAP HAKAMKSVEM HAPLMTSSNL  300
CN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.11e-81HSF family protein