PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543937.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 330aa MW: 37726.3 Da PI: 10.5042

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.6	3.2e-29	146	196	2	52
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 prlrWtpeLH +Fv+av++LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ XP_023543937.1 146 PRLRWTPELHLNFVHAVQRLGGQERATPKLVLQLMNVKGLSIAHVKSHLQE 196 8************************************************83 PP
2	Myb_DNA-binding	49.7	8.3e-16	147	196	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r+rWT+e+++ +v+av++lGg t+k++ + m+ kg++ ++ks++q XP_023543937.1 147 RLRWTPELHLNFVHAVQRLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQE 196 89**********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MSNKLLDQYT LLLSLSVLPY KDLLRQSIGT EFRSWSQMYP RNLLLNFRDR RRWSRTDEGV 60 AAEEKLNPLT LSRKWSLFDL NEEARVEDGD HNISVEVEQS EERKHGLTST KHNNNENTNN 120 SSREEGNGGR RRRRTAVRQY VRSKVPRLRW TPELHLNFVH AVQRLGGQER ATPKLVLQLM 180 NVKGLSIAHV KSHLQEALNF QMYRSKKLDQ TGQVIGEAWA GGVMQGGGGY HNNNKNGGRV 240 SHHYSRWHFH IQFGSVAKLL PSNSPFDPTS CHAKTRQLRR PNHCWEPELE LGLRQTTTTT 300 TKSISSSSSS SSDKESWGCG LRITTDLSLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	135	RRRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-34	G2-like family protein