PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023543734.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | E2F/DP | ||||||||
Protein Properties | Length: 461aa MW: 51803.1 Da PI: 5.0754 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 81.1 | 9.5e-26 | 135 | 200 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn i wkg XP_023543734.1 135 RYDSSLGLLTKKFINLIKQARDGILDLNKAAETL---QV--QKRRIYDITNVLEGIGLIEKKLKNIIYWKG 200 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 461 aa Download sequence |
MRGGSRALNR SEPLPHSQTA QILPPLKRQL AFESNKPLRA SSNSFDQEPD SIAVKPLKPK 60 QTGVMYTNVV ESNDCIQDQG FSKDSLSSVQ TPVSAKGGRM YNKSKTSRRM TSGTQTPISD 120 TTGIYSPLTP AGNCRYDSSL GLLTKKFINL IKQARDGILD LNKAAETLQV QKRRIYDITN 180 VLEGIGLIEK KLKNIIYWKG FNTQVPGNVD SDTSMLQVDV ENLSFEERRL NDKIRTLQER 240 LRNLSEDENL QKWLFVTEED IKSLPCFQNE TLIAIKAPHG TTLEVPDPDE AVDYPQRRYR 300 IVLRSTMGPI DVYLVSQFEE KFEEVNVVKP PRNFLHASSS GSNEHLATEA IGESSRDEIE 360 PRAHLSQYSS SCDVIGSNEF PGGMMKIIPS EFDNDADYWL LSDAEVSITD MWRTDSDIAW 420 DESHMVSQDF LISDVSAQRP RPGSPHSETV EAPSDVNLRQ R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36010.1 | 1e-139 | E2F/DP family protein |