PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543732.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 464aa MW: 52093.3 Da PI: 4.9955

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.1	9.5e-26	134	199	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn i wkg XP_023543732.1 134 RYDSSLGLLTKKFINLIKQARDGILDLNKAAETL---QV--QKRRIYDITNVLEGIGLIEKKLKNIIYWKG 199 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MRGGSRALNR SEPLPHSQTA QILPPLKRQL AFESNKPLRA SSNSFDQEPD SIAVKPLKPK 60 QTGVMYTNVV ESNDCIQDQG FSKDSLSSVQ TPVSAKGGRM YNKSKTSRRM TSGTQTPISD 120 TSIYSPLTPA GNCRYDSSLG LLTKKFINLI KQARDGILDL NKAAETLQVQ KRRIYDITNV 180 LEGIGLIEKK LKNIIYWKGF NTQVPGNVDS DTSMLQVDVE NLSFEERRLN DKIRTLQERL 240 RNLSEDENLQ KWLFVTEEDI KSLPCFQNET LIAIKAPHGT TLEVPDPDEA VDYPQRRYRI 300 VLRSTMGPID VYLVSQFEEK FEEVNVVKPP RNFLHASSSG SNEHLATEAI GESSRDEIEP 360 RAHLSQYSSS CDVIGSNEFP GGMMKIIPSE FDNDADYWLL SDAEVSITDM WRTDSDIAWD 420 ESHMVSQDFL ISDVSAQRPR PGSPHSETVE APSDVNLRQS QTNS

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MRGGSRALNR SEPLPHSQTA QILPPLKRQL AFESNKPLRA SSNSFDQEPD SIAVKPLKPK  60
QTGVMYTNVV ESNDCIQDQG FSKDSLSSVQ TPVSAKGGRM YNKSKTSRRM TSGTQTPISD  120
TSIYSPLTPA GNCRYDSSLG LLTKKFINLI KQARDGILDL NKAAETLQVQ KRRIYDITNV  180
LEGIGLIEKK LKNIIYWKGF NTQVPGNVDS DTSMLQVDVE NLSFEERRLN DKIRTLQERL  240
RNLSEDENLQ KWLFVTEEDI KSLPCFQNET LIAIKAPHGT TLEVPDPDEA VDYPQRRYRI  300
VLRSTMGPID VYLVSQFEEK FEEVNVVKPP RNFLHASSSG SNEHLATEAI GESSRDEIEP  360
RAHLSQYSSS CDVIGSNEFP GGMMKIIPSE FDNDADYWLL SDAEVSITDM WRTDSDIAWD  420
ESHMVSQDFL ISDVSAQRPR PGSPHSETVE APSDVNLRQS QTNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-138	E2F/DP family protein