PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023543592.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NF-YA | ||||||||
Protein Properties | Length: 172aa MW: 19604.3 Da PI: 9.5669 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 97.6 | 1.4e-30 | 77 | 134 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e +k++ ++kpylheSRh hA+rR+Rg+ GrF XP_023543592.1 77 EEPVYVNAKQYHGILRRRQSRAKAEVLNKISRSQKKPYLHESRHLHAMRRERGCRGRF 134 69*******************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MAPPPYGELV VACQSKDASI VLPLMNNEHY EASTHETTAT SYQYKDVYYG QLMPPFGFQT 60 LHNSEYTRMT LPLAMAEEPV YVNAKQYHGI LRRRQSRAKA EVLNKISRSQ KKPYLHESRH 120 LHAMRRERGC RGRFVSKKKM AEPIASMADD GKGSNMSSNC YQGSELHLSA YI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20910.1 | 2e-34 | NF-YA family protein |