PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023543560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C3H | ||||||||
Protein Properties | Length: 600aa MW: 66918.1 Da PI: 6.945 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 19.8 | 1.5e-06 | 122 | 142 | 6 | 27 |
-SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHgp 27 C ff++ G C GdrC F Hgp XP_023543560.1 122 CIFFQK-GLCLKGDRCAFLHGP 142 ******.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 600 aa Download sequence |
MVGGGPQVLE QPQQSLPQPL SAAEEEAVKR NTDCVYFLAS PLTCKKGSEC EYRHSEYARV 60 NPRDCWFWLN GNCLNPKCSF RHPPLDGLVG TPHSTTPSSQ IPSQTSAIPS APVNSSKQAV 120 SCIFFQKGLC LKGDRCAFLH GPSPVPTNKV PQMATNGQAS EPSVKKIAGG TQRSNQEQKN 180 PQEIFLKSVG DASVKLAMKD EGAPSKIGNI NEKSRPPAKV ADGGSRKGQY GWDQRWTSSE 240 KLSLGSAQME RRLSRKSISP EHVQNVDLRH RLNKQRRGNG LRSVINNENV ANRPEERNYH 300 ASRRDSHPSQ ESSMSNRLRG RIKLPRIPSP VRGSNVVPER DFNRGRPGGR LSPGRSLSLS 360 YQESNRDEMK GKLEVDYNNE RRNFNGLNSG RDGMDETSDF AAPKRLAELK GEKHVVSKEK 420 QTLGKRKGFD NDQPGVELSF EGPKSLSEIL RKKRQVKSAV DLPMNNAERE SSERLKERSS 480 IPSVEQGGLS STSKQKANSL EGIMSAPVET FGKEEENINV THRNSSQPIH STNDHVIEAY 540 EETFEDPEYE GDDLRDGEYE YEEVDDREYN YEEGDNVVPE EEYMDDEDGD DFAKKIGVMS |