PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543560.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C3H
Protein Properties Length: 600aa    MW: 66918.1 Da    PI: 6.945
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.81.5e-06122142627
                     -SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   6 CrffartGtCkyGdrCkFaHgp 27 
                     C ff++ G C  GdrC F Hgp
  XP_023543560.1 122 CIFFQK-GLCLKGDRCAFLHGP 142
                     ******.*************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    
MVGGGPQVLE QPQQSLPQPL SAAEEEAVKR NTDCVYFLAS PLTCKKGSEC EYRHSEYARV  60
NPRDCWFWLN GNCLNPKCSF RHPPLDGLVG TPHSTTPSSQ IPSQTSAIPS APVNSSKQAV  120
SCIFFQKGLC LKGDRCAFLH GPSPVPTNKV PQMATNGQAS EPSVKKIAGG TQRSNQEQKN  180
PQEIFLKSVG DASVKLAMKD EGAPSKIGNI NEKSRPPAKV ADGGSRKGQY GWDQRWTSSE  240
KLSLGSAQME RRLSRKSISP EHVQNVDLRH RLNKQRRGNG LRSVINNENV ANRPEERNYH  300
ASRRDSHPSQ ESSMSNRLRG RIKLPRIPSP VRGSNVVPER DFNRGRPGGR LSPGRSLSLS  360
YQESNRDEMK GKLEVDYNNE RRNFNGLNSG RDGMDETSDF AAPKRLAELK GEKHVVSKEK  420
QTLGKRKGFD NDQPGVELSF EGPKSLSEIL RKKRQVKSAV DLPMNNAERE SSERLKERSS  480
IPSVEQGGLS STSKQKANSL EGIMSAPVET FGKEEENINV THRNSSQPIH STNDHVIEAY  540
EETFEDPEYE GDDLRDGEYE YEEVDDREYN YEEGDNVVPE EEYMDDEDGD DFAKKIGVMS