PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543505.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

BES1

Protein Properties

Length: 618aa MW: 69484.3 Da PI: 5.7658

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	158.3	5.3e-49	60	199	1	134
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 gg+ +++++kE+E++k+RER+RRai+++i+aGLR++Gn++lp+raD+n+Vl+AL+reAGwvve DGttyr+++ p +++e ++ +s es+++ XP_023543505.1 60 GGKAKREREKEKERTKLRERHRRAITSRILAGLRQYGNFPLPARADMNDVLAALAREAGWVVEVDGTTYRHSTPPSQSQE--AAFPVRSGESPIS 152 57899***************************************************************8888874444..4455555555555 PP DUF822 96 .sslkssalaspvesysaspksssfpspssldsislasa.......a 134 s ks+++++ ++ + ++ + ++++sp+slds+ +++ a XP_023543505.1 153 sVSFKSCSIKAALDCQPSVHRIDESLSPASLDSVVITERdaknekyA 199 5669*****************************998765543333 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MSGSLNDDSF HQDLQPRANN VSDYLSHQLQ PPQPPPRRPR GFAATAAAIG QTTSTASATG 60 GKAKREREKE KERTKLRERH RRAITSRILA GLRQYGNFPL PARADMNDVL AALAREAGWV 120 VEVDGTTYRH STPPSQSQEA AFPVRSGESP ISSVSFKSCS IKAALDCQPS VHRIDESLSP 180 ASLDSVVITE RDAKNEKYAA LSPLNSAHCL EDQLIQDIRP RENESQFGGT PYVPVYVTLS 240 TGFINNFCLL IDPDGVRQEL SHLKALNVDG VIVDCWWGII EAWNPQKYVW SGYRDLFNII 300 REFKLKLQVV MAFHACEGTE SGDAFINLPQ WVLEIGKENP DIFFTDREGR RNEDCLSWGI 360 DKERVLRGRT GMEVYFDFMR SFHTEFNDLF AEGFVSAIEV GLGASGELKY PSFSKRMGWS 420 YPGIGEFQCY DKYLQQSLRK AAGLRGHSFW ARGPDNSGQY NSRPHESGFF CERGDYDSYY 480 GRFFLQWYAQ MLIYHVDNVL SLASLVFEET KFIVKIPAVY WWYKTSSHAA ELTAGFYNPS 540 NQDGYSPVLD VLKKHSVIVK LVCSGMPVTG QEVDDALADP ESLSWQPAAL IQGAVCFPEL 600 DYFIKCMHGE IVDDLVPC

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MSGSLNDDSF HQDLQPRANN VSDYLSHQLQ PPQPPPRRPR GFAATAAAIG QTTSTASATG  60
GKAKREREKE KERTKLRERH RRAITSRILA GLRQYGNFPL PARADMNDVL AALAREAGWV  120
VEVDGTTYRH STPPSQSQEA AFPVRSGESP ISSVSFKSCS IKAALDCQPS VHRIDESLSP  180
ASLDSVVITE RDAKNEKYAA LSPLNSAHCL EDQLIQDIRP RENESQFGGT PYVPVYVTLS  240
TGFINNFCLL IDPDGVRQEL SHLKALNVDG VIVDCWWGII EAWNPQKYVW SGYRDLFNII  300
REFKLKLQVV MAFHACEGTE SGDAFINLPQ WVLEIGKENP DIFFTDREGR RNEDCLSWGI  360
DKERVLRGRT GMEVYFDFMR SFHTEFNDLF AEGFVSAIEV GLGASGELKY PSFSKRMGWS  420
YPGIGEFQCY DKYLQQSLRK AAGLRGHSFW ARGPDNSGQY NSRPHESGFF CERGDYDSYY  480
GRFFLQWYAQ MLIYHVDNVL SLASLVFEET KFIVKIPAVY WWYKTSSHAA ELTAGFYNPS  540
NQDGYSPVLD VLKKHSVIVK LVCSGMPVTG QEVDDALADP ESLSWQPAAL IQGAVCFPEL  600
DYFIKCMHGE IVDDLVPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.2	0.0	BES1 family protein