PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023543484.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 28263.3 Da PI: 7.7195 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.2 | 3.5e-14 | 79 | 131 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iNs ++ Lr+llP+ + + kKls ++ + YI +Lq XP_023543484.1 79 KKLNHNASERDRRKKINSLYSSLRSLLPStD---QMKKLSNPATISRILSYIPELQ 131 6789*************************77...9999***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MLAVSSPLFS TLQWPLEDPI SLHNHHNSPF PPFEPSDNSF YLHFPPPPPL QPPHVDLDHY 60 PSSATPSPKA GANVSKMAKK LNHNASERDR RKKINSLYSS LRSLLPSTDQ MKKLSNPATI 120 SRILSYIPEL QQQVEGLMRK KEELMAAMVG QEVKSDKEKK TKCAATSSSS IVSTSRLGQR 180 EMAIQISTDI NGGHQNSLSE ILVCLEEEGL LLLNASSFES FDGKVFHNLH LQMESSCRME 240 PKMLSNKLLE MFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 4e-27 | bHLH family protein |