PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543478.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family G2-like
Protein Properties Length: 303aa    MW: 32562.5 Da    PI: 6.9444
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.71.7e-3097150155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_023543478.1  97 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 150
                     59*******************.********************************8 PP
2Myb_DNA-binding48.22.6e-1599149148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
   XP_023543478.1  99 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 149
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MREEHSNWFS RWEEELPSPD ELMPLSQTLI TPDLALAFDI QNSSNTSPPL PCPSPPLSNP  60
LPGSGNGIAP PNSADFGDSA DLGSGAASDE PARTLKRPRL VWTPQLHKRF VDAVAHLGIK  120
NAVPKTIMQL MSVDGLTREN VASHLQKYRL YLKRMQGLSS GGGGGGGGGL VASSDPTDHL  180
FASSPVPPHL LHSARSTSDH FLPFVPMATL QQHHHHQQHM AAAAAAAVAG HPQLQPSYHR  240
QVGHFGSPPN GQFEHPFLAR QSQPVHRMGA PVHNSIPNYI EDLESANANG GRKVLTLFPT  300
GDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.16e-93G2-like family protein