PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023543092.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 163aa MW: 18547.6 Da PI: 8.4531 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.5 | 6.6e-29 | 98 | 156 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk++ +pr+YY+C+s gC vkk+ver+++d ++v++tYeg Hnh XP_023543092.1 98 LDDGFKWRKYGKKSVKNTSHPRNYYKCSSGGCGVKKRVERDRDDSSYVITTYEGIHNHA 156 59********************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MNPLQNPSFF LDYHQFQDSS FSFMDLFDVS SYPLPDFGLE AETTASLLTE ARTGAERRST 60 EATSIDNNSM QVEKRKKERG GGCNNRVAFR TKLVSDILDD GFKWRKYGKK SVKNTSHPRN 120 YYKCSSGGCG VKKRVERDRD DSSYVITTYE GIHNHASPFS DMV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 74 | 113 | KRKKERGGGCNNRVAFRTKLVSDILDDGFKWRKYGKKSVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 2e-40 | WRKY family protein |