PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543061.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 216aa    MW: 24679.2 Da    PI: 8.4948
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.51.3e-32964359
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                     +rY+eClkNhAas+Gg+++DGCgEfmp+ ge+gt++a kCaAC+CHRnFHR+e+ +
  XP_023543061.1  9 VIRYRECLKNHAASTGGYVLDGCGEFMPN-GEDGTPEASKCAACECHRNFHRKEMRD 64
                    589*************************8.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDNSIPLSVI RYRECLKNHA ASTGGYVLDG CGEFMPNGED GTPEASKCAA CECHRNFHRK  60
EMRDEPLSQQ AFLGAFFISN SVRNNGHRSD GMPVPLSRHH HLPAVPISSM MMAFGGGSNG  120
APDESSSEGL NMYYPSDNGA RELFCQQTQL MKKRFRTKFT QEQKEKMIEF AEKLAWKIQK  180
HDELEMQQFC DEVGVRRQVF KVWMHNKKQA MKKKHM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.15e-60ZF-HD family protein