PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023542884.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 291aa MW: 32237.5 Da PI: 8.5528

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023542884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.9	5.2e-39	50	109	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++ l+cprCds+ntkfCyynnyslsqPryfCkaC+ryWt+GG+lrnvPvGgg+rknk+ XP_023542884.1 50 PQEPLRCPRCDSSNTKFCYYNNYSLSQPRYFCKACKRYWTRGGTLRNVPVGGGCRKNKRL 109 57899*****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MALISSSATQ YPQMKNHQSN LDHNNEHHQK GLNLMGSSSR STMVKQQQPP QEPLRCPRCD 60 SSNTKFCYYN NYSLSQPRYF CKACKRYWTR GGTLRNVPVG GGCRKNKRLK RSTTTATTHS 120 SSSPAPDSTS SSSTSCANNI FYGSDLNVPF SGYDHLQPQL NALGLGFSST NMDHRDLHVN 180 GFNSSSVFSS YLLGNPSWSS KFMNGVGSSG LSGSSVFDNL DSPPFDQYHV MGSNGGDQLK 240 DEMKRLDWNQ QNQRDEIIAQ SNDPNCLYAN WSSQIWHDPT NLGSSITSSL I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-38	Dof family protein