PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542883.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 387aa    MW: 43178.7 Da    PI: 6.5071
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.15.8e-31190248259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  XP_023542883.1 190 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 248
                     699************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MFCNLFEMDN DNYQQAGDLT DVIRASSAAT SAAHSSEFSL GDRHLLPHLP TDDSSMNFGD  60
PLLLPTSSTR DPFLHPHFSS FNFDSHGGGW GFTAAERPST VFPRMLQISP TSKVVDGVIT  120
TPPCDSPAVA ATGNSPTSNP LCLRDNSDLQ ISPPRNPAIK RRKNQVKKVV CIPAPAPANS  180
RSSSGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS RTDPNMLVIT  240
YTSEHNHPWP TQRNALAGST RSHPSRTSTS TTRITSPKHE NNNENLASMT IKEEDMNEEQ  300
MTEKAAITTN QHQVEGDHQE FLYDLIFDEF ADQMNEHNRH HATDTMNDNL LRFSNHGFSK  360
GNDEECSKDP FLELYDWTEK SNGSLFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-66WRKY family protein