PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542851.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 90aa    MW: 10199.5 Da    PI: 8.5359
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-0819581554
                    HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    +i +  ++L++llP+ + + +s K+s a +L+++++YI+sL
  XP_023542851.1 19 QITDLVHKLQQLLPEiR-NRHSDKVSAAKVLQETCNYIRSL 58
                    7889999********77.89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MSGRSRSRQS SAIRISDEQI TDLVHKLQQL LPEIRNRHSD KVSAAKVLQE TCNYIRSLHR  60
EVDDLSERLS ELLATSDTAQ AAIIRSLLTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.15e-38bHLH family protein