PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023542408.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 258aa MW: 28689.2 Da PI: 10.6029

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023542408.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.6	1.8e-30	141	194	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rF++ave LGG+e+AtPk++lelm+ k+Ltl+hvkSHLQ++R+ XP_023542408.1 141 PRMRWTSSLHARFIRAVELLGGHERATPKSVLELMDAKDLTLAHVKSHLQMFRT 194 9****************************************************7 PP
2	Myb_DNA-binding	46.3	1e-14	142	193	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++++av++lGg+ t+k++ + m k +tl ++ks++q+++ XP_023542408.1 142 RMRWTSSLHARFIRAVELLGGHeraTPKSVLELMDaKDLTLAHVKSHLQMFR 193 89***********************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MLGKDINVPD LSLQISPPKT DASTSFDVRQ QTQTPPVDTE LSLSNNSVVS VDILADRFRP 60 IRGIPIYSNG LSSSSSTYSN QTQTTSSLSS LSLLSSPPLN QFIVQNHQNP LLGVSNFWCS 120 NNNRSRLFMP RIQSRRSFRA PRMRWTSSLH ARFIRAVELL GGHERATPKS VLELMDAKDL 180 TLAHVKSHLQ MFRTVKNTDK QTGSSGYGEE DFLPATPTPH HEATCLLNHR RGLTASLEPH 240 VNGSSPSINY HRNSSRRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-40	G2-like family protein