PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023542235.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 344aa MW: 37971.1 Da PI: 9.1123

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023542235.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.1	3e-31	200	255	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k r+rW++eLH+rFv+a+++LGGs++AtPk+i+elmkv++Lt+++vkSHLQkYRl+ XP_023542235.1 200 KRRRRWSSELHRRFVRALQRLGGSQVATPKQIRELMKVDDLTNDEVKSHLQKYRLH 255 689***************************************************97 PP
2	Myb_DNA-binding	40.5	6.4e-13	202	253	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r rW+ e++ ++v+a ++lGg t+k I + m +t ++ks++qky+ XP_023542235.1 202 RRRWSSELHRRFVRALQRLGGSqvaTPKQIRELMKvDDLTNDEVKSHLQKYR 253 78****************99**********99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MDVPDNVVDI RVGMDLRHYA DALDQERRKI LVFQRELPLC VELVTRAIDS CRQKLSGVSS 60 ESSEHTSSDG PVLEEFIPIK KDSGDPNFEQ SKPYINEVGP LDWLKSAQLW NQTLDPPVVE 120 DVAKKPPSAV VEEEKKGVGG GFRPFQEKNP SETEAAAVVG KTVCCYPVME ATASSTAETV 180 SKGSGGNSQR EEKESQTQRK RRRRWSSELH RRFVRALQRL GGSQVATPKQ IRELMKVDDL 240 TNDEVKSHLQ KYRLHARRPT NSAMPDSAVQ KFVVVGSMWE PPPPPPPPKY MAMTTGQVTP 300 VARVVQRQKT AEGGMGRPIG GMVQLNSPPA SYSTLTATTS PAKA

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MDVPDNVVDI RVGMDLRHYA DALDQERRKI LVFQRELPLC VELVTRAIDS CRQKLSGVSS  60
ESSEHTSSDG PVLEEFIPIK KDSGDPNFEQ SKPYINEVGP LDWLKSAQLW NQTLDPPVVE  120
DVAKKPPSAV VEEEKKGVGG GFRPFQEKNP SETEAAAVVG KTVCCYPVME ATASSTAETV  180
SKGSGGNSQR EEKESQTQRK RRRRWSSELH RRFVRALQRL GGSQVATPKQ IRELMKVDDL  240
TNDEVKSHLQ KYRLHARRPT NSAMPDSAVQ KFVVVGSMWE PPPPPPPPKY MAMTTGQVTP  300
VARVVQRQKT AEGGMGRPIG GMVQLNSPPA SYSTLTATTS PAKA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	198	204	QRKRRRR
2	199	203	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-47	G2-like family protein