PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023542046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 285aa MW: 31180.6 Da PI: 6.6224 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.8 | 0.00035 | 228 | 250 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cg F++ L H+r+H XP_023542046.1 228 HECAICGAEFTSGQALGGHMRRH 250 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MEGRKEGRME VDHEDGVMGS KEQALIAKGK RTKRPRLHSP TPFTISSNGE AGFVVLDHDH 60 DHDSNVVAEN NDFVAENNDF VAENNDYVAV PVHNVSFSPS SSSAELQPSI TTDEEEDMAN 120 CLILLAQGRP QTPKHVDNNR STVGAEKGVG IGCYGYECKT CYRTFPSFQA LGGHRASHKK 180 SKAIEAEKKV LLCSDDEEIQ FKNNMTHSIS LQLNQKGSLC SNGKGKVHEC AICGAEFTSG 240 QALGGHMRRH RAMPVAMNTA LSLTPMAMEG EDQRQPKRQX LVGHT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04390.1 | 3e-45 | C2H2 family protein |