PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023541965.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Trihelix
Protein Properties Length: 267aa    MW: 30156 Da    PI: 5.8396
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023541965.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix476.9e-1520110186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +Wt++ + +Li+a  ++  +l+rg+l++++W +v++ +       ++  rs +qCk++++ ++k+yk ++++ ++ +   +s++p++ +l+
  XP_023541965.1  20 CWTEDATSTLIDAWGRRFLDLNRGNLRQKDWLDVADSVnalhgLTKKTYRSDVQCKNRIDTVKKKYKTEAARVSSSHGSFVSSWPFYGRLH 110
                     8*************************************99999899999***********************9999999999*****9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MADLTPSSSI SRQVPIREDC WTEDATSTLI DAWGRRFLDL NRGNLRQKDW LDVADSVNAL  60
HGLTKKTYRS DVQCKNRIDT VKKKYKTEAA RVSSSHGSFV SSWPFYGRLH ELIGPSAFPR  120
SFRKMPPPTA AAAEAVVAVS RKRPAAAMDV GVFRRNYSAM AAAAAAAALT EDEDEEEERV  180
SEEEEEEEED AAEGGEGMSR LARAIQRFGE VYESVEAEKV RQMVELEKQR MQFAKDLEVQ  240
RMHMFMETQV QLEKIKRGKK KSTPSDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-32Trihelix family protein