PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023541951.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 322aa    MW: 36779.9 Da    PI: 4.6143
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023541951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.69.6e-1693140354
             AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     ykGVr++k +g+++AeIrd +     r +r +lg++ taeeAa a+ + + ++e
  XP_023541951.1  93 YKGVRRRK-WGKYAAEIRDpF-----RgRRLWLGTYNTAEEAAVAYQRKKHEFE 140
                     9****998.**********66.....56******************88877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MYGKEEKKMK QLREGKSISV RKVRVLFHDP DATDYSSEED EHVNQDAKNI VWEISVPDIR  60
HKISKESSHG GKIRTKAEVK ASSSRTQRSS SMYKGVRRRK WGKYAAEIRD PFRGRRLWLG  120
TYNTAEEAAV AYQRKKHEFE SMQSMAKGSG ELGREQPEEK SGSVADYTDE SENIIALFSH  180
PSPSSVLDVC SESLCSNVDQ TMEHSITEGC MPVVDDEDIL KSIYEDEQSI LDIMEATPTP  240
TQTPTPITLP RLDTQELDFQ VLEDNSLIFN DFDQFFHDTN FRDNCTLHSI ENSVGALDLP  300
PMDMEFDKEF SWFDDTMSIS CM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-21ERF family protein