PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023541899.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 468aa MW: 50983.6 Da PI: 8.4361 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 106.6 | 1.2e-33 | 200 | 256 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers +++++ei+Y+geHnhe XP_023541899.1 200 DDGYNWRKYGQKQVKGSEFPRSYYKCTYPNCPVKKKVERSL-EGHITEIIYKGEHNHE 256 8****************************************.***************8 PP | |||||||
2 | WRKY | 104.6 | 5.2e-33 | 378 | 436 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gC+v+k+ver+++d+k+v++tYeg+Hnh+ XP_023541899.1 378 LDDGYRWRKYGQKTVKGNPYPRSYYKCTTLGCNVRKHVERASTDQKAVITTYEGKHNHD 436 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 468 aa Download sequence |
MGDDEDKLPP SSVPSPLKSK AFPLRPTINL PPRTSMESLL SGGPGLGLGF SPGPMTLVSS 60 FFSDSDDCKS FSQLLAGAMT SPVAVPPTAS ELKDSAGLPD SPGLFSPDQG TFGLTHQQAL 120 AQVTLQAVEA YSHKQIQAHS VAGSAASSKL LTVFPSEKAK DQPVPLQLLN SAVASKESSD 180 ISQSDQRSVS SSCNVDRPAD DGYNWRKYGQ KQVKGSEFPR SYYKCTYPNC PVKKKVERSL 240 EGHITEIIYK GEHNHERPQP NKRAKDVGNS NGCSSVHGNT DLYSQVKSGY LNKLNEQSAV 300 SSVVKKDRES NLVKHGQLLD ASDSEGAGEI ETGPNKNDED EPDAKRRNTE ARVEPVSSHR 360 TLTESRIIVQ TTSEVDLLDD GYRWRKYGQK TVKGNPYPRS YYKCTTLGCN VRKHVERAST 420 DQKAVITTYE GKHNHDVPAG KISSHGTANS NVPRLKSQNI GTEKDFYR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 1e-114 | WRKY family protein |