PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541730.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 334aa MW: 36847.1 Da PI: 7.231

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.2	5e-40	52	111	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+ XP_023541730.1 52 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV 111 7899******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MGLTSLQVCM DSSDWLQQGS GNEESGMDCS SLSGDMLSCS RPLTERRLRP QHDQALKCPR 60 CDSTHTKFCY YNNYSLSQPR YFCKTCRRYW TKGGTLRNIP VGGGCRKNKK VTTTKKSNSD 120 PIHHQQQQPR QPISQIHHHH HIASSSSSLH NHNHNPTDLH LSFSNQVHFP SQFNPLIGTP 180 NFISSIGMLE AHHHTARPID FMDSKMEALV GNAHYNPTNS DHLAMVGGFA GDHIAAAGHA 240 LSPSFHGLCS PYGLSLDGNA AGMGQGVMIP YEHEQNEDPN AMEVKPNTKL LALEWQDQEG 300 CSEKVESYGF INGIGSSWNG MMNGYGSSTT NPLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	1e-44	Dof family protein