PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023541693.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 272aa    MW: 29591.6 Da    PI: 5.194
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023541693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.92.3e-2970127359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+ver++ dp++++i Y+ eHnh+
  XP_023541693.1  70 DSWAWRKYGQKPIKGSPYPRAYYRCSSSkGCPARKQVERNRLDPTMLVISYSCEHNHS 127
                     99************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MDATFNNNRH QFYSGDPFDD SDDKALDSPP STSTAAAKKG RRGMKKKVVS VRINGDTPRN  60
SSGSTTPPPD SWAWRKYGQK PIKGSPYPRA YYRCSSSKGC PARKQVERNR LDPTMLVISY  120
SCEHNHSGPV SRNINNHHQA AAVEKPGSPE SVPVHPEPEP EVEEKFVDMG EESLITGDEF  180
SWFGEMETTS STVLENSIFS GCSSGLGDSL SSDVAMLFPM GDNDVDDSLF ADLGELPECS  240
LVFRHGGGRG LAADEQPAAG QRRITPWCGT TT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.13e-61WRKY family protein