PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023541660.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 295aa    MW: 32054.9 Da    PI: 9.434
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023541660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.7e-1495139347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_023541660.1  95 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 139
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MTTDVPDSAV SGGDTKEIML FGVRVVVDPM RKSVSMNNLS QYQHPPAVSN DDNGGNSKGN  60
ISAAERKEDS AAGYASADDA VPNSGGNRER KRGVPWTEEE HKLFLLGLQK VGKGDWRGIS  120
RNFVKTRTPT QVASHAQKYF LRRSNLNRRR RRSSLFDITT DTVKVAAEEH QIQLQDNSSK  180
LQSLLPPPPP ETCNINGYHH PMPTFPLSVC PAVLPVPNPI ENLTLRQENL DLAAEILPLN  240
PTTPNINSNS KSALKSGALS LNLSLPSNSA NSSSKHPDFP GISRMSSGDN IISVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.25e-53MYB_related family protein