PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541654.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 380aa MW: 42572.7 Da PI: 8.8993

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	74.8	9e-24	23	88	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ e + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++w+g XP_023541654.1 23 RKQKSLGLLCSNFLSLYNHDEVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88 79***************999********.....****************************98 PP
2	E2F_TDP	76.1	3.4e-24	154	234	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+ ++++l+e+a+ L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g XP_023541654.1 154 RREKSLALLTQNFVKLFICSHVNMISLDEAARLLLGDghnssIMRTKVRRLYDIANVLSSMNLIEKthttdTRKPAFRWLG 234 689************************************999**********************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MAALPSSSAL PDSSSSRHHT YSRKQKSLGL LCSNFLSLYN HDEVHSIGLD DAASRLGVER 60 RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKDNCSA SDGTDYAKVS 120 DDEDDDERLS NPTGSQNSTA TMPKSSSSLK ADNRREKSLA LLTQNFVKLF ICSHVNMISL 180 DEAARLLLGD GHNSSIMRTK VRRLYDIANV LSSMNLIEKT HTTDTRKPAF RWLGVRGKVK 240 NEPIVLPESK KRAFGTDVTN VSYKKTKTEN SAYPSLNHCL NMQKPVPCEN SSQDDSQNSQ 300 DQECERTSKS YQFGPFAPVT VAKVGVLDNN NVKRTHDWES LSSTFRPQYH NQALKELFSH 360 YVEAWKSWYS EAVKKPIQIS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MAALPSSSAL PDSSSSRHHT YSRKQKSLGL LCSNFLSLYN HDEVHSIGLD DAASRLGVER  60
RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKDNCSA SDGTDYAKVS  120
DDEDDDERLS NPTGSQNSTA TMPKSSSSLK ADNRREKSLA LLTQNFVKLF ICSHVNMISL  180
DEAARLLLGD GHNSSIMRTK VRRLYDIANV LSSMNLIEKT HTTDTRKPAF RWLGVRGKVK  240
NEPIVLPESK KRAFGTDVTN VSYKKTKTEN SAYPSLNHCL NMQKPVPCEN SSQDDSQNSQ  300
DQECERTSKS YQFGPFAPVT VAKVGVLDNN NVKRTHDWES LSSTFRPQYH NQALKELFSH  360
YVEAWKSWYS EAVKKPIQIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-129	E2F/DP family protein